Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
EPHA1P21709 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA1P21709 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
EPHA1P21709 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA1P21709 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.25□□□□□ -0.13
EPHA1P21709 CRYGEP-201ENST00000412192 528 ntBASIC14.25□□□□□ -0.13
EPHA1P21709 ELK2BP-201ENST00000415014 1224 ntBASIC14.25□□□□□ -0.13
EPHA1P21709 HMGN1P19-201ENST00000436976 333 ntBASIC14.25□□□□□ -0.13
EPHA1P21709 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.25□□□□□ -0.13
EPHA1P21709 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA1P21709 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 AC027796.2-201ENST00000575326 344 ntBASIC14.25□□□□□ -0.13
EPHA1P21709 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.25□□□□□ -0.13
EPHA1P21709 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
EPHA1P21709 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EPHA1P21709 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
EPHA1P21709 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 AC002310.6-201ENST00000624451 1377 ntBASIC14.24□□□□□ -0.13
EPHA1P21709 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 AC092053.1-201ENST00000605787 1936 ntBASIC14.24□□□□□ -0.13
EPHA1P21709 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.24□□□□□ -0.13
EPHA1P21709 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 KLF4P1-201ENST00000412782 1185 ntBASIC14.24□□□□□ -0.13
EPHA1P21709 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.24□□□□□ -0.13
EPHA1P21709 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.24□□□□□ -0.13
EPHA1P21709 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
EPHA1P21709 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 AL139327.4-201ENST00000612362 153 ntBASIC14.24□□□□□ -0.13
EPHA1P21709 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.24□□□□□ -0.13
EPHA1P21709 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
EPHA1P21709 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA1P21709 LINC02012-201ENST00000608206 1725 ntBASIC14.24□□□□□ -0.13
EPHA1P21709 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA1P21709 NCF1C-201ENST00000438382 1427 ntBASIC14.24□□□□□ -0.13
EPHA1P21709 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
EPHA1P21709 HYMAI-201ENST00000635591 3347 ntBASIC14.23□□□□□ -0.13
EPHA1P21709 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA1P21709 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
EPHA1P21709 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA1P21709 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA1P21709 RNF216P1-203ENST00000404404 2427 ntBASIC14.23□□□□□ -0.13
EPHA1P21709 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms