Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HLA-DOAP06340 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOAP06340 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOAP06340 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HLA-DOAP06340 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HLA-DOAP06340 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.36■□□□□ 0.69
HLA-DOAP06340 AC015922.1-201ENST00000421102 1152 ntBASIC19.36■□□□□ 0.69
HLA-DOAP06340 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 AC061975.2-201ENST00000581722 295 ntBASIC19.36■□□□□ 0.69
HLA-DOAP06340 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HLA-DOAP06340 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HLA-DOAP06340 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 AF228730.6-201ENST00000641497 218 ntBASIC19.35■□□□□ 0.69
HLA-DOAP06340 AC084121.3-201ENST00000641716 218 ntBASIC19.35■□□□□ 0.69
HLA-DOAP06340 AC105233.6-201ENST00000642093 218 ntBASIC19.35■□□□□ 0.69
HLA-DOAP06340 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.35■□□□□ 0.69
HLA-DOAP06340 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HLA-DOAP06340 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 LINC01144-201ENST00000626198 1710 ntBASIC19.34■□□□□ 0.69
HLA-DOAP06340 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 AL080243.2-201ENST00000418783 582 ntBASIC19.34■□□□□ 0.69
HLA-DOAP06340 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 AC009477.1-201ENST00000452936 217 ntBASIC19.34■□□□□ 0.69
HLA-DOAP06340 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HLA-DOAP06340 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HLA-DOAP06340 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms