Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNA1P02708 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA1P02708 AC008494.3-201ENST00000606615 944 ntBASIC17.82■□□□□ 0.44
CHRNA1P02708 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CHRNA1P02708 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA1P02708 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CHRNA1P02708 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 PCGF3-213ENST00000620529 1899 ntBASIC17.82■□□□□ 0.44
CHRNA1P02708 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 AC005622.1-201ENST00000636801 1703 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CHRNA1P02708 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
CHRNA1P02708 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 INE1-201ENST00000456273 945 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 SDHAP3-202ENST00000515467 728 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.81■□□□□ 0.44
CHRNA1P02708 WASH4P-201ENST00000564273 1246 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 IGHV3-72-202ENST00000621503 303 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 AC106820.2-201ENST00000563775 3264 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHRNA1P02708 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHRNA1P02708 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 AC005915.1-201ENST00000624912 2018 ntBASIC17.81■□□□□ 0.44
CHRNA1P02708 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHRNA1P02708 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 SLC7A15P-201ENST00000424028 1363 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 AC138932.1-201ENST00000534164 6830 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHRNA1P02708 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 AC007274.1-201ENST00000439805 662 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNA1P02708 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNA1P02708 AL589987.1-201ENST00000453380 819 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 AL139010.1-201ENST00000454878 894 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.8■□□□□ 0.44
CHRNA1P02708 AL359881.2-201ENST00000602973 570 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 AL109936.8-201ENST00000641772 604 ntBASIC17.8■□□□□ 0.44
CHRNA1P02708 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA1P02708 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.8■□□□□ 0.44
CHRNA1P02708 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CHRNA1P02708 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA1P02708 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.8■□□□□ 0.44
CHRNA1P02708 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA1P02708 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHRNA1P02708 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CHRNA1P02708 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHRNA1P02708 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHRNA1P02708 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms