Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 AL158212.4-201ENST00000624062 1286 ntBASIC19■□□□□ 0.63
COL2A1P02458 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19■□□□□ 0.63
COL2A1P02458 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL2A1P02458 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19■□□□□ 0.63
COL2A1P02458 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 MYCLP2-201ENST00000449268 967 ntBASIC18.99■□□□□ 0.63
COL2A1P02458 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.99■□□□□ 0.63
COL2A1P02458 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.99■□□□□ 0.63
COL2A1P02458 AC132938.2-201ENST00000579188 680 ntBASIC18.99■□□□□ 0.63
COL2A1P02458 CTBP2P3-201ENST00000585629 1255 ntBASIC18.99■□□□□ 0.63
COL2A1P02458 TMEM261P1-201ENST00000604899 340 ntBASIC18.99■□□□□ 0.63
COL2A1P02458 LINC01115-203ENST00000606068 577 ntBASIC18.99■□□□□ 0.63
COL2A1P02458 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.99■□□□□ 0.63
COL2A1P02458 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 AL591163.1-201ENST00000641757 987 ntBASIC18.99■□□□□ 0.63
COL2A1P02458 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
COL2A1P02458 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL2A1P02458 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.99■□□□□ 0.63
COL2A1P02458 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.99■□□□□ 0.63
COL2A1P02458 PCDHB18P-201ENST00000524813 2368 ntBASIC18.98■□□□□ 0.63
COL2A1P02458 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.98■□□□□ 0.63
COL2A1P02458 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.98■□□□□ 0.63
COL2A1P02458 ATP5G2P4-201ENST00000442175 420 ntBASIC18.98■□□□□ 0.63
COL2A1P02458 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.98■□□□□ 0.63
COL2A1P02458 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
COL2A1P02458 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
COL2A1P02458 AL162274.1-201ENST00000617191 1098 ntBASIC18.98■□□□□ 0.63
COL2A1P02458 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL2A1P02458 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL2A1P02458 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
COL2A1P02458 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.98■□□□□ 0.63
COL2A1P02458 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.97■□□□□ 0.63
COL2A1P02458 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.97■□□□□ 0.63
COL2A1P02458 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
COL2A1P02458 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL2A1P02458 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 AIRN-201ENST00000601203 4374 ntBASIC18.97■□□□□ 0.63
COL2A1P02458 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
COL2A1P02458 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.97■□□□□ 0.63
COL2A1P02458 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL2A1P02458 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
COL2A1P02458 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.97■□□□□ 0.63
COL2A1P02458 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.97■□□□□ 0.63
COL2A1P02458 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms