Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRUB2O95900 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.29■□□□□ 0.36
TRUB2O95900 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRUB2O95900 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
TRUB2O95900 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRUB2O95900 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.28■□□□□ 0.36
TRUB2O95900 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.28■□□□□ 0.36
TRUB2O95900 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRUB2O95900 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRUB2O95900 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 TFAMP1-201ENST00000412727 736 ntBASIC17.28■□□□□ 0.36
TRUB2O95900 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.28■□□□□ 0.36
TRUB2O95900 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
TRUB2O95900 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.28■□□□□ 0.36
TRUB2O95900 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.28■□□□□ 0.36
TRUB2O95900 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 FAM86C2P-203ENST00000528684 1004 ntBASIC17.28■□□□□ 0.36
TRUB2O95900 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.28■□□□□ 0.36
TRUB2O95900 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 AC020765.3-201ENST00000613051 740 ntBASIC17.28■□□□□ 0.36
TRUB2O95900 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.28■□□□□ 0.36
TRUB2O95900 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRUB2O95900 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRUB2O95900 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRUB2O95900 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 AKAP8P1-201ENST00000434743 1349 ntBASIC17.27■□□□□ 0.36
TRUB2O95900 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRUB2O95900 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.27■□□□□ 0.36
TRUB2O95900 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 KRT18P34-201ENST00000488218 1270 ntBASIC17.27■□□□□ 0.36
TRUB2O95900 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.27■□□□□ 0.36
TRUB2O95900 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.27■□□□□ 0.36
TRUB2O95900 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.27■□□□□ 0.36
TRUB2O95900 AL135744.1-201ENST00000565098 629 ntBASIC17.27■□□□□ 0.36
TRUB2O95900 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.27■□□□□ 0.36
TRUB2O95900 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.27■□□□□ 0.36
TRUB2O95900 AC026120.1-201ENST00000611536 926 ntBASIC17.27■□□□□ 0.36
TRUB2O95900 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms