Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.8■□□□□ 0.12
LCMT2O60294 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LCMT2O60294 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.79■□□□□ 0.12
LCMT2O60294 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.79■□□□□ 0.12
LCMT2O60294 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 KRT18P13-201ENST00000400056 1290 ntBASIC15.79■□□□□ 0.12
LCMT2O60294 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.79■□□□□ 0.12
LCMT2O60294 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.79■□□□□ 0.12
LCMT2O60294 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.79■□□□□ 0.12
LCMT2O60294 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 FAM86C2P-203ENST00000528684 1004 ntBASIC15.79■□□□□ 0.12
LCMT2O60294 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.79■□□□□ 0.12
LCMT2O60294 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 AC026120.1-201ENST00000611536 926 ntBASIC15.79■□□□□ 0.12
LCMT2O60294 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LCMT2O60294 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 AC005622.1-201ENST00000636801 1703 ntBASIC15.79■□□□□ 0.12
LCMT2O60294 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.79■□□□□ 0.12
LCMT2O60294 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LCMT2O60294 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LCMT2O60294 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.78■□□□□ 0.12
LCMT2O60294 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.78■□□□□ 0.12
LCMT2O60294 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
LCMT2O60294 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LCMT2O60294 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.78■□□□□ 0.12
LCMT2O60294 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LCMT2O60294 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
LCMT2O60294 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 AC006449.5-201ENST00000610658 2098 ntBASIC15.78■□□□□ 0.12
LCMT2O60294 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LCMT2O60294 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LCMT2O60294 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LCMT2O60294 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
LCMT2O60294 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LCMT2O60294 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms