Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP2AO43633 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP2AO43633 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CHMP2AO43633 KRT8P23-201ENST00000560090 1207 ntBASIC18.56■□□□□ 0.56
CHMP2AO43633 AC004449.1-201ENST00000564240 433 ntBASIC18.56■□□□□ 0.56
CHMP2AO43633 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.56■□□□□ 0.56
CHMP2AO43633 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP2AO43633 LINC00628-201ENST00000628516 1289 ntBASIC18.56■□□□□ 0.56
CHMP2AO43633 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMP2AO43633 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP2AO43633 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHMP2AO43633 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP2AO43633 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 ALOX12P2-203ENST00000570921 1945 ntBASIC18.55■□□□□ 0.56
CHMP2AO43633 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 PCGF3-213ENST00000620529 1899 ntBASIC18.55■□□□□ 0.56
CHMP2AO43633 GGT3P-204ENST00000453783 1664 ntBASIC18.55■□□□□ 0.56
CHMP2AO43633 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 RBPMS2P1-201ENST00000437762 623 ntBASIC18.55■□□□□ 0.56
CHMP2AO43633 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP2AO43633 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP2AO43633 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.55■□□□□ 0.56
CHMP2AO43633 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.55■□□□□ 0.56
CHMP2AO43633 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CHMP2AO43633 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMP2AO43633 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMP2AO43633 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP2AO43633 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP2AO43633 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.54■□□□□ 0.56
CHMP2AO43633 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP2AO43633 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 AC020765.3-201ENST00000613051 740 ntBASIC18.54■□□□□ 0.56
CHMP2AO43633 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.54■□□□□ 0.56
CHMP2AO43633 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.54■□□□□ 0.56
CHMP2AO43633 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.54■□□□□ 0.56
CHMP2AO43633 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHMP2AO43633 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms