Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 AC020763.4-201ENST00000623414 4170 ntBASIC24.14■■□□□ 1.45
HFM1A2PYH4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
HFM1A2PYH4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
HFM1A2PYH4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HFM1A2PYH4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
HFM1A2PYH4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
HFM1A2PYH4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
HFM1A2PYH4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
HFM1A2PYH4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
HFM1A2PYH4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 AC002472.2-201ENST00000442739 958 ntBASIC24.11■■□□□ 1.45
HFM1A2PYH4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
HFM1A2PYH4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC24.11■■□□□ 1.45
HFM1A2PYH4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 COPE-202ENST00000349893 948 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 INGX-202ENST00000489074 768 ntBASIC24.1■■□□□ 1.45
HFM1A2PYH4 RN7SL204P-201ENST00000582831 262 ntBASIC24.1■■□□□ 1.45
HFM1A2PYH4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC24.1■■□□□ 1.45
HFM1A2PYH4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
HFM1A2PYH4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms