Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 AC131009.4-201ENST00000624048 1740 ntBASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 AC023908.3-201ENST00000564211 3047 ntBASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 VENTXP7-201ENST00000475503 772 ntBASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 AC091167.2-201ENST00000579581 588 ntBASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 AP006294.2-201ENST00000641667 209 ntBASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 REXO1L3P-201ENST00000622202 1288 ntBASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TCRBV3S1A0A5B6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 AC073508.3-201ENST00000619697 1419 ntBASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 PAWRP1-201ENST00000451083 565 ntBASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 KRT8P26-201ENST00000534154 1276 ntBASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 CYP2A7P1-201ENST00000595391 815 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms