Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 CYP4F24P-201ENST00000586049 1580 ntBASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 AC004987.2-201ENST00000395959 1148 ntBASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 SDHAP3-202ENST00000515467 728 ntBASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 AC005332.8-201ENST00000622750 2735 ntBASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SYNPO2Q9UMS6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SYNPO2Q9UMS6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC015922.1-201ENST00000421102 1152 ntBASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC004840.1-201ENST00000636359 365 ntBASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AF228730.6-201ENST00000641497 218 ntBASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC084121.3-201ENST00000641716 218 ntBASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 AC105233.6-201ENST00000642093 218 ntBASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SYNPO2Q9UMS6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SYNPO2Q9UMS6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms