Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 PMS2P4-201ENST00000412466 1052 ntBASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 SLC25A39P2-201ENST00000537614 270 ntBASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 AC091167.2-201ENST00000579581 588 ntBASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 AC093525.9-201ENST00000624961 1746 ntBASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HDAC6Q9UBN7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 AC107890.1-201ENST00000422478 521 ntBASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 AC125807.1-201ENST00000483097 614 ntBASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.68■□□□□ 0.58
HDAC6Q9UBN7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AC016396.2-201ENST00000562575 1417 ntBASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AC092053.1-201ENST00000605787 1936 ntBASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 BASP1P1-201ENST00000430708 665 ntBASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AC087641.1-201ENST00000557561 1021 ntBASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AL162727.3-201ENST00000635661 2787 ntBASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 FO538757.1-201ENST00000623083 1397 ntBASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC6Q9UBN7 AL603756.1-201ENST00000606511 2163 ntBASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms