Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 LINC00982-205ENST00000420957 435 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 AL662844.1-201ENST00000546340 181 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 MTDHP4-201ENST00000600287 670 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 AC104692.2-201ENST00000603054 253 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TP73-AS1-207ENST00000624167 988 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 AL365203.3-201ENST00000609742 2057 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 NCF1C-201ENST00000438382 1427 ntBASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 RPS2P28-201ENST00000314255 741 ntBASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AP002469.2-201ENST00000531724 424 ntBASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AC021087.4-201ENST00000563761 564 ntBASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AL589182.2-201ENST00000619332 1049 ntBASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AC243591.1-201ENST00000452967 1364 ntBASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 AC002310.6-201ENST00000624451 1377 ntBASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LIN7CQ9NUP9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms