Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 EGLN1P1-201ENST00000531623 762 ntBASIC19.65■□□□□ 0.74
RTN4Q9NQC3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 AC015849.4-201ENST00000603678 421 ntTSL 5 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC19.65■□□□□ 0.74
RTN4Q9NQC3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RTN4Q9NQC3 AC018892.3-201ENST00000623986 2499 ntBASIC19.64■□□□□ 0.74
RTN4Q9NQC3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AC005562.1-201ENST00000583030 3219 ntBASIC19.64■□□□□ 0.73
RTN4Q9NQC3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AC008550.1-201ENST00000511500 884 ntBASIC19.64■□□□□ 0.73
RTN4Q9NQC3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 MIR3917-201ENST00000580971 93 ntBASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AL450472.2-201ENST00000603663 1156 ntBASIC19.64■□□□□ 0.73
RTN4Q9NQC3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 GRK6P1-201ENST00000400595 1711 ntBASIC19.64■□□□□ 0.73
RTN4Q9NQC3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.64■□□□□ 0.73
RTN4Q9NQC3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 ALOX12P2-203ENST00000570921 1945 ntBASIC19.63■□□□□ 0.73
RTN4Q9NQC3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 HLA-J-201ENST00000462773 1622 ntBASIC19.63■□□□□ 0.73
RTN4Q9NQC3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.63■□□□□ 0.73
RTN4Q9NQC3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms