Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 POLD2P1-201ENST00000511220 997 ntBASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 KRT18P58-201ENST00000527480 1120 ntBASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 AL671883.3-201ENST00000603274 991 ntBASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 AL078644.1-201ENST00000609881 752 ntBASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP25Q9BV90 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 AC006449.6-201ENST00000612330 2296 ntBASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 AP000347.1-202ENST00000435868 847 ntBASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 PGAM5P1-201ENST00000518923 814 ntBASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 AC005622.1-201ENST00000636801 1703 ntBASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SNRNP25Q9BV90 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 KRT18P34-201ENST00000488218 1270 ntBASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 AC099522.2-201ENST00000607001 744 ntBASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP25Q9BV90 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 AL596087.1-201ENST00000400979 1969 ntBASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNRNP25Q9BV90 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms