Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL135744.1-201ENST00000565098 629 ntBASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.61■□□□□ 0.09
PTCHD1Q96NR3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC016027.1-202ENST00000607927 1699 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AL512652.2-201ENST00000625156 1716 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 ADH5P3-201ENST00000433842 1137 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 RN7SL589P-201ENST00000481268 310 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC105339.1-204ENST00000636249 355 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AC006538.1-201ENST00000567905 1585 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 AL118508.1-201ENST00000613502 2345 ntBASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PTCHD1Q96NR3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 CNN2P11-201ENST00000429351 262 ntBASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 HLA-J-202ENST00000469281 1241 ntBASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 KRT18P34-201ENST00000488218 1270 ntBASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 KRT8P48-201ENST00000515599 1220 ntBASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 AP001160.2-201ENST00000596071 487 ntBASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.59■□□□□ 0.09
PTCHD1Q96NR3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms