Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AC004817.3-201ENST00000602957 2129 ntBASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 IFNL4P1-201ENST00000607083 540 ntBASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AL022326.1-202ENST00000641533 845 ntBASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AL596087.1-201ENST00000400979 1969 ntBASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 AKR1C7P-201ENST00000305623 895 ntBASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 FGFR3P6-201ENST00000457012 610 ntBASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 SCARNA2-201ENST00000458748 420 ntBASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 NKAPP1-205ENST00000585790 367 ntBASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RTN4IP1Q8WWV3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms