Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC148Q8NFR7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 LINC01144-201ENST00000626198 1710 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 NFIC-211ENST00000641145 8399 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 GPX1P2-201ENST00000429271 606 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 AC092865.5-201ENST00000545435 363 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 MIR3687-2-201ENST00000577708 61 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 MIR3687-1-201ENST00000614492 61 ntBASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CCDC148Q8NFR7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 AKAP8P1-201ENST00000434743 1349 ntBASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 FAM86C2P-203ENST00000528684 1004 ntBASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 AC005829.1-201ENST00000570002 483 ntBASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 AC010327.4-202ENST00000591484 748 ntBASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC148Q8NFR7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 ADH5P3-201ENST00000433842 1137 ntBASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 RN7SL589P-201ENST00000481268 310 ntBASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms