Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 MIR1233-2-201ENST00000408138 82 ntBASIC17.29■□□□□ 0.36
ATP11CQ8NB49 MIR1233-1-201ENST00000408722 82 ntBASIC17.29■□□□□ 0.36
ATP11CQ8NB49 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 KRT19P2-202ENST00000557173 1012 ntBASIC17.29■□□□□ 0.36
ATP11CQ8NB49 ACTL9-202ENST00000612068 1252 ntBASIC17.29■□□□□ 0.36
ATP11CQ8NB49 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 AC068418.2-201ENST00000577309 3703 ntBASIC17.29■□□□□ 0.36
ATP11CQ8NB49 PCDHA1-201ENST00000378133 2726 ntBASIC17.29■□□□□ 0.36
ATP11CQ8NB49 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP11CQ8NB49 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AC092364.2-201ENST00000596710 2692 ntBASIC17.28■□□□□ 0.36
ATP11CQ8NB49 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 UPF3AP3-201ENST00000420996 769 ntBASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AC107918.2-201ENST00000530817 355 ntBASIC17.28■□□□□ 0.36
ATP11CQ8NB49 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 GPALPP1-207ENST00000611650 899 ntBASIC17.28■□□□□ 0.36
ATP11CQ8NB49 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AC022188.1-201ENST00000620960 1664 ntBASIC17.28■□□□□ 0.36
ATP11CQ8NB49 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP11CQ8NB49 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 MCCD1P2-201ENST00000423228 335 ntBASIC17.27■□□□□ 0.36
ATP11CQ8NB49 GPX1P2-201ENST00000429271 606 ntBASIC17.27■□□□□ 0.36
ATP11CQ8NB49 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 PDPK2P-202ENST00000562415 1191 ntBASIC17.27■□□□□ 0.36
ATP11CQ8NB49 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 AC006538.3-201ENST00000612495 578 ntBASIC17.27■□□□□ 0.36
ATP11CQ8NB49 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.27■□□□□ 0.36
ATP11CQ8NB49 REXO1L3P-201ENST00000622202 1288 ntBASIC17.27■□□□□ 0.36
ATP11CQ8NB49 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms