Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AC044860.1-202ENST00000559481 777 ntBASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS3Q8IXF0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 SPDYE19P-201ENST00000338590 713 ntBASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 SPDYE18-201ENST00000510091 1050 ntBASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 DOC2GP-202ENST00000514950 1163 ntBASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 IGHV3-72-202ENST00000621503 303 ntBASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 AL391825.1-201ENST00000457671 1364 ntBASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS3Q8IXF0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 AC139713.2-201ENST00000641328 2723 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 AL645608.8-201ENST00000606034 2086 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 AC087499.6-201ENST00000411576 835 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 INE1-201ENST00000456273 945 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 GPR53P-205ENST00000457298 1084 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 GIMAP3P-201ENST00000495150 836 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 AC093004.1-201ENST00000508850 424 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 WASH4P-201ENST00000564273 1246 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 AL139011.1-202ENST00000642063 584 ntBASIC17■□□□□ 0.31
NPAS3Q8IXF0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS3Q8IXF0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17■□□□□ 0.31
NPAS3Q8IXF0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms