Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 AC092933.1-201ENST00000393644 945 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 BCRP2-202ENST00000447763 634 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 CSF2RBP1-201ENST00000447905 391 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 KLF2P4-201ENST00000451959 1225 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 BCRP6-201ENST00000510112 632 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 BCRP7-201ENST00000511549 544 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 AC074044.1-201ENST00000609673 707 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.6■□□□□ 0.89
SMIM5Q71RC9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.6■□□□□ 0.89
SMIM5Q71RC9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 AC067852.2-201ENST00000590513 2313 ntBASIC20.59■□□□□ 0.89
SMIM5Q71RC9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 AL031731.1-201ENST00000642131 2094 ntBASIC20.59■□□□□ 0.89
SMIM5Q71RC9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 TIMM17BP1-201ENST00000545713 516 ntBASIC20.59■□□□□ 0.89
SMIM5Q71RC9 AC124947.2-201ENST00000547118 1133 ntBASIC20.59■□□□□ 0.89
SMIM5Q71RC9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 AC026979.3-201ENST00000607315 403 ntBASIC20.59■□□□□ 0.89
SMIM5Q71RC9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM5Q71RC9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 AL139010.1-201ENST00000454878 894 ntBASIC20.58■□□□□ 0.89
SMIM5Q71RC9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 RN7SL399P-201ENST00000471648 279 ntBASIC20.58■□□□□ 0.89
SMIM5Q71RC9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.58■□□□□ 0.89
SMIM5Q71RC9 MIR5189-201ENST00000577370 114 ntBASIC20.58■□□□□ 0.89
SMIM5Q71RC9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 AC020765.3-201ENST00000613051 740 ntBASIC20.58■□□□□ 0.89
SMIM5Q71RC9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM5Q71RC9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.58■□□□□ 0.88
SMIM5Q71RC9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM5Q71RC9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM5Q71RC9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM5Q71RC9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM5Q71RC9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.57■□□□□ 0.88
SMIM5Q71RC9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.57■□□□□ 0.88
SMIM5Q71RC9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.57■□□□□ 0.88
SMIM5Q71RC9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms