Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AC009477.1-201ENST00000452936 217 ntBASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AC009407.1-201ENST00000568958 598 ntBASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AL844908.2-201ENST00000609461 460 ntBASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 CETN4P-206ENST00000642099 2168 ntBASIC14.83□□□□□ -0.04
RNFT1Q5M7Z0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 AL589702.1-201ENST00000641229 1509 ntBASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 AC020765.3-201ENST00000613051 740 ntBASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 AC012313.1-201ENST00000593393 3059 ntBASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.82□□□□□ -0.04
RNFT1Q5M7Z0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 AC105020.1-201ENST00000435356 2205 ntBASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 CRB3P1-201ENST00000449338 276 ntBASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 AP005018.1-201ENST00000525475 301 ntBASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 AL079307.3-201ENST00000556114 283 ntBASIC14.81□□□□□ -0.04
RNFT1Q5M7Z0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms