Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
HSPG2P98160 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
HSPG2P98160 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
HSPG2P98160 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.01□□□□□ -0.81
HSPG2P98160 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.01□□□□□ -0.81
HSPG2P98160 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
HSPG2P98160 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.01□□□□□ -0.81
HSPG2P98160 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
HSPG2P98160 KRTAP10-13P-201ENST00000412914 571 ntBASIC10.01□□□□□ -0.81
HSPG2P98160 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
HSPG2P98160 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 NUP210P1-202ENST00000504322 710 ntBASIC10.01□□□□□ -0.81
HSPG2P98160 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.01□□□□□ -0.81
HSPG2P98160 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
HSPG2P98160 REXO1L8P-201ENST00000604378 1897 ntBASIC10.01□□□□□ -0.81
HSPG2P98160 AC026979.3-201ENST00000607315 403 ntBASIC10.01□□□□□ -0.81
HSPG2P98160 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
HSPG2P98160 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
HSPG2P98160 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 GUK1-206ENST00000366723 845 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10□□□□□ -0.81
HSPG2P98160 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 PARVG-202ENST00000415224 999 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10□□□□□ -0.81
HSPG2P98160 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC10□□□□□ -0.81
HSPG2P98160 RN7SL736P-201ENST00000613111 269 ntBASIC10□□□□□ -0.81
HSPG2P98160 CU633904.3-201ENST00000624042 1029 ntBASIC10□□□□□ -0.81
HSPG2P98160 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 PFN2-202ENST00000423691 911 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 CMC1-204ENST00000423894 549 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10□□□□□ -0.81
HSPG2P98160 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10□□□□□ -0.81
HSPG2P98160 AC134698.3-201ENST00000523880 214 ntBASIC10□□□□□ -0.81
HSPG2P98160 WT1-AS_6.1-201ENST00000614919 121 ntBASIC10□□□□□ -0.81
HSPG2P98160 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 AC134312.5-201ENST00000568031 1313 ntBASIC10□□□□□ -0.81
HSPG2P98160 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10□□□□□ -0.81
HSPG2P98160 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC10□□□□□ -0.81
HSPG2P98160 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 RN7SL181P-201ENST00000462921 277 ntBASIC10□□□□□ -0.81
HSPG2P98160 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10□□□□□ -0.81
HSPG2P98160 CYGB-203ENST00000589145 788 ntTSL 3 BASIC10□□□□□ -0.81
HSPG2P98160 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC10□□□□□ -0.81
HSPG2P98160 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC10□□□□□ -0.81
HSPG2P98160 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC10□□□□□ -0.81
HSPG2P98160 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10□□□□□ -0.81
HSPG2P98160 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC10□□□□□ -0.81
HSPG2P98160 EEF1DP1-201ENST00000585891 896 ntBASIC10□□□□□ -0.81
HSPG2P98160 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC10□□□□□ -0.81
HSPG2P98160 AC093503.3-201ENST00000624917 2352 ntBASIC10□□□□□ -0.81
HSPG2P98160 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC9.99□□□□□ -0.81
HSPG2P98160 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
HSPG2P98160 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
HSPG2P98160 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
HSPG2P98160 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms