Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.63□□□□□ -0.07
NKX6-1P78426 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.63□□□□□ -0.07
NKX6-1P78426 PMS2P4-201ENST00000412466 1052 ntBASIC14.63□□□□□ -0.07
NKX6-1P78426 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.63□□□□□ -0.07
NKX6-1P78426 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 AC067863.1-201ENST00000494933 530 ntBASIC14.63□□□□□ -0.07
NKX6-1P78426 DUX4L17-201ENST00000557360 1267 ntBASIC14.63□□□□□ -0.07
NKX6-1P78426 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NKX6-1P78426 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.63□□□□□ -0.07
NKX6-1P78426 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
NKX6-1P78426 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.63□□□□□ -0.07
NKX6-1P78426 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NKX6-1P78426 AL023806.1-201ENST00000603994 1649 ntBASIC14.63□□□□□ -0.07
NKX6-1P78426 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX6-1P78426 AC005034.1-201ENST00000426657 489 ntBASIC14.62□□□□□ -0.07
NKX6-1P78426 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 AC093214.1-201ENST00000511688 1107 ntBASIC14.62□□□□□ -0.07
NKX6-1P78426 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 AC112191.1-201ENST00000523689 701 ntBASIC14.62□□□□□ -0.07
NKX6-1P78426 AC124947.2-201ENST00000547118 1133 ntBASIC14.62□□□□□ -0.07
NKX6-1P78426 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.62□□□□□ -0.07
NKX6-1P78426 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.62□□□□□ -0.07
NKX6-1P78426 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.62□□□□□ -0.07
NKX6-1P78426 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 AJ011932.1-201ENST00000621707 465 ntBASIC14.62□□□□□ -0.07
NKX6-1P78426 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
NKX6-1P78426 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
NKX6-1P78426 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NKX6-1P78426 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX6-1P78426 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
NKX6-1P78426 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.61□□□□□ -0.07
NKX6-1P78426 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX6-1P78426 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NKX6-1P78426 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX6-1P78426 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms