Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN5P54829 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN5P54829 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN5P54829 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN5P54829 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN5P54829 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN5P54829 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN5P54829 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 TTTY23B-201ENST00000442790 549 ntBASIC17.05■□□□□ 0.32
PTPN5P54829 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN5P54829 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN5P54829 RN7SL190P-201ENST00000582519 257 ntBASIC17.05■□□□□ 0.32
PTPN5P54829 AC103810.3-201ENST00000583567 96 ntBASIC17.05■□□□□ 0.32
PTPN5P54829 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PTPN5P54829 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PTPN5P54829 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN5P54829 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN5P54829 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN5P54829 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN5P54829 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PTPN5P54829 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.04■□□□□ 0.32
PTPN5P54829 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN5P54829 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 AC087163.2-201ENST00000457299 853 ntBASIC17.04■□□□□ 0.32
PTPN5P54829 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN5P54829 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN5P54829 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPN5P54829 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN5P54829 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PTPN5P54829 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN5P54829 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN5P54829 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPN5P54829 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN5P54829 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN5P54829 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms