Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 AL031055.1-201ENST00000606362 631 ntBASIC18.2■□□□□ 0.5
PMS1P54277 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.2■□□□□ 0.5
PMS1P54277 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PMS1P54277 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PMS1P54277 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PMS1P54277 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PMS1P54277 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PMS1P54277 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PMS1P54277 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.19■□□□□ 0.5
PMS1P54277 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PMS1P54277 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.19■□□□□ 0.5
PMS1P54277 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PMS1P54277 AC020765.3-201ENST00000613051 740 ntBASIC18.19■□□□□ 0.5
PMS1P54277 AC005622.1-201ENST00000636801 1703 ntBASIC18.19■□□□□ 0.5
PMS1P54277 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PMS1P54277 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.19■□□□□ 0.5
PMS1P54277 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PMS1P54277 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PMS1P54277 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PMS1P54277 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 RHOQP3-201ENST00000437982 621 ntBASIC18.18■□□□□ 0.5
PMS1P54277 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.18■□□□□ 0.5
PMS1P54277 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.18■□□□□ 0.5
PMS1P54277 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 AC105917.1-201ENST00000506637 2539 ntBASIC18.18■□□□□ 0.5
PMS1P54277 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PMS1P54277 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
PMS1P54277 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PMS1P54277 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PMS1P54277 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.17■□□□□ 0.5
PMS1P54277 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 CRYGEP-201ENST00000412192 528 ntBASIC18.17■□□□□ 0.5
PMS1P54277 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.17■□□□□ 0.5
PMS1P54277 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.17■□□□□ 0.5
PMS1P54277 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.17■□□□□ 0.5
PMS1P54277 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 AL031432.2-201ENST00000566714 459 ntBASIC18.17■□□□□ 0.5
PMS1P54277 AL928711.1-201ENST00000570165 459 ntBASIC18.17■□□□□ 0.5
PMS1P54277 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 AL645728.2-201ENST00000641974 660 ntBASIC18.17■□□□□ 0.5
PMS1P54277 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.17■□□□□ 0.5
PMS1P54277 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.17■□□□□ 0.5
PMS1P54277 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PMS1P54277 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.17■□□□□ 0.5
PMS1P54277 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms