Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 AP006294.1-201ENST00000415407 339 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
CSNK1EP49674 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1EP49674 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.12■□□□□ 0.17
CSNK1EP49674 AC093724.1-201ENST00000448659 1027 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 GPR53P-205ENST00000457298 1084 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 IGHV3-71-201ENST00000523324 359 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.12■□□□□ 0.17
CSNK1EP49674 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.12■□□□□ 0.17
CSNK1EP49674 AC024267.1-201ENST00000582320 895 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 AC004790.1-201ENST00000612686 536 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CSNK1EP49674 IGHV3-72-202ENST00000621503 303 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 PP12613-201ENST00000424958 2230 ntBASIC16.12■□□□□ 0.17
CSNK1EP49674 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1EP49674 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSNK1EP49674 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
CSNK1EP49674 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1EP49674 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1EP49674 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1EP49674 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1EP49674 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSNK1EP49674 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 AL589702.1-201ENST00000641229 1509 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CSNK1EP49674 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.11■□□□□ 0.17
CSNK1EP49674 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1EP49674 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 SPDYE18-201ENST00000510091 1050 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.11■□□□□ 0.17
CSNK1EP49674 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1EP49674 HILS1-202ENST00000545329 423 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1EP49674 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.11■□□□□ 0.17
CSNK1EP49674 AC132938.2-201ENST00000579188 680 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 AC008494.3-201ENST00000606615 944 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.11■□□□□ 0.17
CSNK1EP49674 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.11■□□□□ 0.17
CSNK1EP49674 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.11■□□□□ 0.17
CSNK1EP49674 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 AL591163.1-201ENST00000641757 987 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CSNK1EP49674 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.11■□□□□ 0.17
CSNK1EP49674 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1EP49674 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1EP49674 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSNK1EP49674 AL512652.2-201ENST00000625156 1716 ntBASIC16.11■□□□□ 0.17
CSNK1EP49674 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1EP49674 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CSNK1EP49674 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.1■□□□□ 0.17
CSNK1EP49674 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.1■□□□□ 0.17
CSNK1EP49674 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.1■□□□□ 0.17
CSNK1EP49674 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.1■□□□□ 0.17
CSNK1EP49674 AC093004.1-201ENST00000508850 424 ntBASIC16.1■□□□□ 0.17
CSNK1EP49674 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.1■□□□□ 0.17
CSNK1EP49674 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.1■□□□□ 0.17
CSNK1EP49674 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSNK1EP49674 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.1■□□□□ 0.17
CSNK1EP49674 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.1■□□□□ 0.17
CSNK1EP49674 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms