Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CENPFP49454 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CENPFP49454 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPFP49454 HINT2P1-201ENST00000419438 481 ntBASIC18.35■□□□□ 0.53
CENPFP49454 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPFP49454 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPFP49454 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPFP49454 AC021097.1-201ENST00000607902 574 ntBASIC18.35■□□□□ 0.53
CENPFP49454 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPFP49454 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CENPFP49454 AC005052.1-201ENST00000625181 2492 ntBASIC18.35■□□□□ 0.53
CENPFP49454 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.35■□□□□ 0.53
CENPFP49454 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CENPFP49454 AL118558.3-201ENST00000607414 1079 ntBASIC18.35■□□□□ 0.53
CENPFP49454 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPFP49454 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 KRT8P19-201ENST00000551916 1455 ntBASIC18.34■□□□□ 0.53
CENPFP49454 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
CENPFP49454 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 LINC01451-201ENST00000623792 534 ntBASIC18.34■□□□□ 0.53
CENPFP49454 AC128714.1-201ENST00000637035 887 ntBASIC18.34■□□□□ 0.53
CENPFP49454 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPFP49454 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.34■□□□□ 0.53
CENPFP49454 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 KRT8P49-201ENST00000604166 1432 ntBASIC18.34■□□□□ 0.53
CENPFP49454 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.34■□□□□ 0.53
CENPFP49454 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CENPFP49454 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.34■□□□□ 0.53
CENPFP49454 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPFP49454 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPFP49454 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.34■□□□□ 0.53
CENPFP49454 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CENPFP49454 SNX33P1-201ENST00000592116 1762 ntBASIC18.34■□□□□ 0.53
CENPFP49454 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPFP49454 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CENPFP49454 SERBP1P3-201ENST00000459980 809 ntBASIC18.34■□□□□ 0.53
CENPFP49454 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPFP49454 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPFP49454 SPCS2P2-201ENST00000603270 608 ntBASIC18.34■□□□□ 0.53
CENPFP49454 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CENPFP49454 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.33■□□□□ 0.53
CENPFP49454 AC135050.7-201ENST00000624508 2218 ntBASIC18.33■□□□□ 0.53
CENPFP49454 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPFP49454 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPFP49454 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPFP49454 KRT8P22-201ENST00000562317 1415 ntBASIC18.33■□□□□ 0.53
CENPFP49454 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CENPFP49454 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPFP49454 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CENPFP49454 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.33■□□□□ 0.53
CENPFP49454 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.33■□□□□ 0.53
CENPFP49454 PFN1P12-201ENST00000455938 534 ntBASIC18.33■□□□□ 0.53
CENPFP49454 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.33■□□□□ 0.53
CENPFP49454 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.33■□□□□ 0.53
CENPFP49454 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CENPFP49454 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CENPFP49454 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CENPFP49454 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.33■□□□□ 0.53
CENPFP49454 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CENPFP49454 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPFP49454 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPFP49454 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.33■□□□□ 0.52
CENPFP49454 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPFP49454 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.33■□□□□ 0.52
CENPFP49454 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPFP49454 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPFP49454 GGT4P-201ENST00000623672 1708 ntBASIC18.32■□□□□ 0.52
CENPFP49454 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPFP49454 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPFP49454 CHMP4BP1-201ENST00000556017 588 ntBASIC18.32■□□□□ 0.52
CENPFP49454 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CENPFP49454 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms