Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SLC6A12P48065 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
SLC6A12P48065 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC6A12P48065 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 AC099522.2-201ENST00000607001 744 ntBASIC15.93■□□□□ 0.14
SLC6A12P48065 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 AL161645.1-201ENST00000622716 1255 ntBASIC15.93■□□□□ 0.14
SLC6A12P48065 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A12P48065 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC6A12P48065 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 AC022188.1-201ENST00000620960 1664 ntBASIC15.92■□□□□ 0.14
SLC6A12P48065 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC6A12P48065 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC6A12P48065 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A12P48065 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SLC6A12P48065 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SLC6A12P48065 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 AC002056.1-201ENST00000395613 760 ntBASIC15.92■□□□□ 0.14
SLC6A12P48065 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A12P48065 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A12P48065 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SLC6A12P48065 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SLC6A12P48065 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.92■□□□□ 0.14
SLC6A12P48065 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.92■□□□□ 0.14
SLC6A12P48065 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC6A12P48065 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SLC6A12P48065 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 AL603832.2-201ENST00000566195 2125 ntBASIC15.92■□□□□ 0.14
SLC6A12P48065 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A12P48065 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A12P48065 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC6A12P48065 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A12P48065 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 OR6D1P-203ENST00000641209 4860 ntBASIC15.91■□□□□ 0.14
SLC6A12P48065 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A12P48065 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A12P48065 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A12P48065 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A12P48065 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A12P48065 AC024909.3-201ENST00000611513 2257 ntBASIC15.91■□□□□ 0.14
SLC6A12P48065 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A12P48065 AC073439.1-201ENST00000624121 1774 ntBASIC15.91■□□□□ 0.14
SLC6A12P48065 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A12P48065 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A12P48065 AC112191.1-201ENST00000523689 701 ntBASIC15.91■□□□□ 0.14
SLC6A12P48065 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC6A12P48065 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC6A12P48065 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 AL365203.3-201ENST00000609742 2057 ntBASIC15.91■□□□□ 0.14
SLC6A12P48065 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC6A12P48065 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC6A12P48065 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms