Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MTHFRP42898 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.25■□□□□ 0.35
MTHFRP42898 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.25■□□□□ 0.35
MTHFRP42898 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
MTHFRP42898 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.25■□□□□ 0.35
MTHFRP42898 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.25■□□□□ 0.35
MTHFRP42898 RPS2P32-201ENST00000439199 892 ntBASIC17.25■□□□□ 0.35
MTHFRP42898 ACA64.2-201ENST00000459014 129 ntBASIC17.25■□□□□ 0.35
MTHFRP42898 RN7SL618P-201ENST00000477850 296 ntBASIC17.25■□□□□ 0.35
MTHFRP42898 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.25■□□□□ 0.35
MTHFRP42898 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.25■□□□□ 0.35
MTHFRP42898 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.25■□□□□ 0.35
MTHFRP42898 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.25■□□□□ 0.35
MTHFRP42898 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 AL133215.2-201ENST00000609242 977 ntBASIC17.25■□□□□ 0.35
MTHFRP42898 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.25■□□□□ 0.35
MTHFRP42898 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MTHFRP42898 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MTHFRP42898 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.24■□□□□ 0.35
MTHFRP42898 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MTHFRP42898 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MTHFRP42898 SPDYE19P-201ENST00000338590 713 ntBASIC17.24■□□□□ 0.35
MTHFRP42898 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.24■□□□□ 0.35
MTHFRP42898 DOC2GP-202ENST00000514950 1163 ntBASIC17.24■□□□□ 0.35
MTHFRP42898 BANF1P1-201ENST00000553684 263 ntBASIC17.24■□□□□ 0.35
MTHFRP42898 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 FRMD8P1-201ENST00000440433 1524 ntBASIC17.24■□□□□ 0.35
MTHFRP42898 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.24■□□□□ 0.35
MTHFRP42898 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MTHFRP42898 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MTHFRP42898 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MTHFRP42898 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
MTHFRP42898 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.23■□□□□ 0.35
MTHFRP42898 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
MTHFRP42898 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MTHFRP42898 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 MIR1909-201ENST00000411312 80 ntBASIC17.23■□□□□ 0.35
MTHFRP42898 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
MTHFRP42898 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MTHFRP42898 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 AC132938.2-201ENST00000579188 680 ntBASIC17.23■□□□□ 0.35
MTHFRP42898 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.23■□□□□ 0.35
MTHFRP42898 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.23■□□□□ 0.35
MTHFRP42898 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.23■□□□□ 0.35
MTHFRP42898 AL591163.1-201ENST00000641757 987 ntBASIC17.23■□□□□ 0.35
MTHFRP42898 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms