Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.74■□□□□ 0.91
COL15A1P39059 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
COL15A1P39059 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.74■□□□□ 0.91
COL15A1P39059 GGT4P-201ENST00000623672 1708 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL15A1P39059 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL15A1P39059 AC078925.2-201ENST00000624013 1973 ntBASIC20.74■□□□□ 0.91
COL15A1P39059 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL15A1P39059 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL15A1P39059 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.73■□□□□ 0.91
COL15A1P39059 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
COL15A1P39059 AC099568.2-201ENST00000609194 695 ntBASIC20.73■□□□□ 0.91
COL15A1P39059 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 AC005915.1-201ENST00000624912 2018 ntBASIC20.73■□□□□ 0.91
COL15A1P39059 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 AL603756.1-201ENST00000606511 2163 ntBASIC20.73■□□□□ 0.91
COL15A1P39059 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL15A1P39059 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL15A1P39059 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.73■□□□□ 0.91
COL15A1P39059 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 TMEM14DP-201ENST00000422205 345 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 KRT17P8-201ENST00000540749 863 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 MIR6805-201ENST00000615055 62 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.72■□□□□ 0.91
COL15A1P39059 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.72■□□□□ 0.91
COL15A1P39059 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.72■□□□□ 0.91
COL15A1P39059 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.72■□□□□ 0.91
COL15A1P39059 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL15A1P39059 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.72■□□□□ 0.91
COL15A1P39059 TTTY23B-201ENST00000442790 549 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL15A1P39059 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.72■□□□□ 0.91
COL15A1P39059 AC022494.1-201ENST00000466044 728 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 ELK1P1-201ENST00000485699 580 ntBASIC20.72■□□□□ 0.91
COL15A1P39059 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
COL15A1P39059 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms