Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.42■□□□□ 0.22
NELFEP18615 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 CXCL1P1-201ENST00000502804 216 ntBASIC16.42■□□□□ 0.22
NELFEP18615 YBX1P5-201ENST00000509441 847 ntBASIC16.42■□□□□ 0.22
NELFEP18615 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.42■□□□□ 0.22
NELFEP18615 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.42■□□□□ 0.22
NELFEP18615 KRT19P2-202ENST00000557173 1012 ntBASIC16.42■□□□□ 0.22
NELFEP18615 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 C20orf181-201ENST00000623918 480 ntBASIC16.42■□□□□ 0.22
NELFEP18615 AC007064.4-201ENST00000637740 555 ntBASIC16.42■□□□□ 0.22
NELFEP18615 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NELFEP18615 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NELFEP18615 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NELFEP18615 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 AL136379.1-201ENST00000623471 2642 ntBASIC16.41■□□□□ 0.22
NELFEP18615 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NELFEP18615 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NELFEP18615 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 AC211486.1-202ENST00000416371 468 ntBASIC16.41■□□□□ 0.22
NELFEP18615 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.41■□□□□ 0.22
NELFEP18615 AC211476.1-201ENST00000503899 468 ntBASIC16.41■□□□□ 0.22
NELFEP18615 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.41■□□□□ 0.22
NELFEP18615 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.41■□□□□ 0.22
NELFEP18615 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
NELFEP18615 AP001160.2-201ENST00000596071 487 ntBASIC16.41■□□□□ 0.22
NELFEP18615 AC023141.13-201ENST00000604991 943 ntBASIC16.41■□□□□ 0.22
NELFEP18615 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.41■□□□□ 0.22
NELFEP18615 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NELFEP18615 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.41■□□□□ 0.22
NELFEP18615 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NELFEP18615 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms