Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPNS1P04632 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CAPNS1P04632 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
CAPNS1P04632 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPNS1P04632 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPNS1P04632 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CAPNS1P04632 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CAPNS1P04632 COX5BP2-201ENST00000392354 334 ntBASIC16.49■□□□□ 0.23
CAPNS1P04632 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPNS1P04632 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.49■□□□□ 0.23
CAPNS1P04632 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPNS1P04632 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPNS1P04632 AC116407.2-201ENST00000613639 860 ntBASIC16.49■□□□□ 0.23
CAPNS1P04632 AL049757.1-201ENST00000616842 1596 ntBASIC16.49■□□□□ 0.23
CAPNS1P04632 AP001059.3-201ENST00000619053 235 ntBASIC16.49■□□□□ 0.23
CAPNS1P04632 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CAPNS1P04632 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPNS1P04632 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPNS1P04632 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPNS1P04632 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CAPNS1P04632 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPNS1P04632 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPNS1P04632 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPNS1P04632 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 COX5BP8-201ENST00000416911 349 ntBASIC16.48■□□□□ 0.23
CAPNS1P04632 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPNS1P04632 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPNS1P04632 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPNS1P04632 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPNS1P04632 KLF2P3-201ENST00000451977 1087 ntBASIC16.48■□□□□ 0.23
CAPNS1P04632 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPNS1P04632 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.48■□□□□ 0.23
CAPNS1P04632 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.48■□□□□ 0.23
CAPNS1P04632 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 AC026120.1-201ENST00000611536 926 ntBASIC16.48■□□□□ 0.23
CAPNS1P04632 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 AC024909.3-201ENST00000611513 2257 ntBASIC16.48■□□□□ 0.23
CAPNS1P04632 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CAPNS1P04632 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CAPNS1P04632 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPNS1P04632 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPNS1P04632 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CAPNS1P04632 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CAPNS1P04632 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CAPNS1P04632 AL365203.3-201ENST00000609742 2057 ntBASIC16.47■□□□□ 0.23
CAPNS1P04632 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPNS1P04632 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.47■□□□□ 0.23
CAPNS1P04632 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CAPNS1P04632 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CAPNS1P04632 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CAPNS1P04632 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.47■□□□□ 0.23
CAPNS1P04632 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.47■□□□□ 0.23
CAPNS1P04632 ARSEP1-201ENST00000420443 635 ntBASIC16.47■□□□□ 0.23
CAPNS1P04632 FAM58DP-201ENST00000428076 619 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms