Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.1□□□□□ -0.79
APOBP04114 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
APOBP04114 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.1□□□□□ -0.79
APOBP04114 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC10.1□□□□□ -0.79
APOBP04114 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 FAM197Y7-201ENST00000432892 766 ntBASIC10.1□□□□□ -0.79
APOBP04114 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 VDAC1P7-201ENST00000462417 847 ntBASIC10.1□□□□□ -0.79
APOBP04114 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.1□□□□□ -0.79
APOBP04114 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC10.1□□□□□ -0.79
APOBP04114 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 AL049840.4-201ENST00000602422 811 ntBASIC10.1□□□□□ -0.79
APOBP04114 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.1□□□□□ -0.79
APOBP04114 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.1□□□□□ -0.79
APOBP04114 AC138028.6-201ENST00000616106 1482 ntBASIC10.1□□□□□ -0.79
APOBP04114 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
APOBP04114 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.1□□□□□ -0.79
APOBP04114 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 AC006001.1-201ENST00000325130 474 ntBASIC10.1□□□□□ -0.79
APOBP04114 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC10.1□□□□□ -0.79
APOBP04114 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.1□□□□□ -0.79
APOBP04114 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.1□□□□□ -0.79
APOBP04114 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.1□□□□□ -0.79
APOBP04114 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
APOBP04114 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
APOBP04114 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 AC078819.1-201ENST00000547454 765 ntBASIC10.09□□□□□ -0.79
APOBP04114 AC012085.1-201ENST00000548270 765 ntBASIC10.09□□□□□ -0.79
APOBP04114 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC10.09□□□□□ -0.79
APOBP04114 MIR7845-201ENST00000618396 99 ntBASIC10.09□□□□□ -0.79
APOBP04114 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
APOBP04114 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 AC004898.1-201ENST00000451057 766 ntBASIC10.09□□□□□ -0.79
APOBP04114 AKR7A2P1-201ENST00000460134 915 ntBASIC10.09□□□□□ -0.79
APOBP04114 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 AC010328.2-201ENST00000597698 1111 ntBASIC10.09□□□□□ -0.79
APOBP04114 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.09□□□□□ -0.79
APOBP04114 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
APOBP04114 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 SPTLC1P5-201ENST00000450718 252 ntBASIC10.09□□□□□ -0.79
APOBP04114 AL139010.1-201ENST00000454878 894 ntBASIC10.09□□□□□ -0.79
APOBP04114 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 PTP4A1P2-201ENST00000546033 454 ntBASIC10.09□□□□□ -0.79
APOBP04114 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC10.09□□□□□ -0.79
APOBP04114 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
APOBP04114 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.09□□□□□ -0.79
APOBP04114 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 CROCCP2-202ENST00000412962 2773 ntBASIC10.08□□□□□ -0.8
APOBP04114 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.08□□□□□ -0.8
APOBP04114 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC10.08□□□□□ -0.8
APOBP04114 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
APOBP04114 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC10.08□□□□□ -0.8
APOBP04114 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.08□□□□□ -0.8
APOBP04114 RHOXF1P1-202ENST00000635473 501 ntBASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms