Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TOP3BO95985 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 KLF4P1-201ENST00000412782 1185 ntBASIC17■□□□□ 0.31
TOP3BO95985 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17■□□□□ 0.31
TOP3BO95985 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17■□□□□ 0.31
TOP3BO95985 AL391256.1-201ENST00000443260 1855 ntBASIC17■□□□□ 0.31
TOP3BO95985 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 DUX4L27-201ENST00000554796 1261 ntBASIC17■□□□□ 0.31
TOP3BO95985 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 AL008721.1-201ENST00000609964 604 ntBASIC17■□□□□ 0.31
TOP3BO95985 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 AC004706.3-202ENST00000621574 984 ntBASIC17■□□□□ 0.31
TOP3BO95985 AL513210.1-201ENST00000629608 234 ntBASIC17■□□□□ 0.31
TOP3BO95985 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
TOP3BO95985 PAUPAR-201ENST00000630360 2965 ntBASIC17■□□□□ 0.31
TOP3BO95985 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TOP3BO95985 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TOP3BO95985 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.99■□□□□ 0.31
TOP3BO95985 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 AC236430.1-201ENST00000402231 743 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.99■□□□□ 0.31
TOP3BO95985 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.99■□□□□ 0.31
TOP3BO95985 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.99■□□□□ 0.31
TOP3BO95985 PRYP5-201ENST00000451909 266 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 AC093214.1-201ENST00000511688 1107 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 AC005225.4-201ENST00000557330 545 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 AC025678.2-201ENST00000562061 970 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.99■□□□□ 0.31
TOP3BO95985 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.99■□□□□ 0.31
TOP3BO95985 AJ011932.1-201ENST00000621707 465 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 AC073592.5-201ENST00000624854 528 ntBASIC16.99■□□□□ 0.31
TOP3BO95985 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TOP3BO95985 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.99■□□□□ 0.31
TOP3BO95985 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.99■□□□□ 0.31
TOP3BO95985 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TOP3BO95985 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TOP3BO95985 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TOP3BO95985 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TOP3BO95985 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.98■□□□□ 0.31
TOP3BO95985 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.98■□□□□ 0.31
TOP3BO95985 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TOP3BO95985 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.98■□□□□ 0.31
TOP3BO95985 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TOP3BO95985 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.98■□□□□ 0.31
TOP3BO95985 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.98■□□□□ 0.31
TOP3BO95985 KRT19P2-202ENST00000557173 1012 ntBASIC16.98■□□□□ 0.31
TOP3BO95985 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.98■□□□□ 0.31
TOP3BO95985 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.98■□□□□ 0.31
TOP3BO95985 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.98■□□□□ 0.31
TOP3BO95985 AC010507.1-201ENST00000633895 436 ntBASIC16.98■□□□□ 0.31
TOP3BO95985 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.98■□□□□ 0.31
TOP3BO95985 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.98■□□□□ 0.31
TOP3BO95985 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.98■□□□□ 0.31
TOP3BO95985 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TOP3BO95985 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TOP3BO95985 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms