Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 COMP-202ENST00000425807 2292 ntTSL 2 BASIC24.35■■□□□ 1.49
RAPGEF3O95398 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAPGEF3O95398 CD276-201ENST00000318424 2738 ntTSL 5 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 EIF4HP1-201ENST00000453115 687 ntBASIC24.34■■□□□ 1.49
RAPGEF3O95398 FXR1-221ENST00000491674 365 ntTSL 2 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 AL008638.5-201ENST00000623814 1298 ntBASIC24.34■■□□□ 1.49
RAPGEF3O95398 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAPGEF3O95398 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 PCDHB17P-201ENST00000539533 2393 ntBASIC24.34■■□□□ 1.49
RAPGEF3O95398 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RAPGEF3O95398 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 SOCS2P1-201ENST00000417727 557 ntBASIC24.33■■□□□ 1.49
RAPGEF3O95398 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 RPL8-205ENST00000527914 551 ntTSL 3 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 PAM16-215ENST00000577031 548 ntTSL 4 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RAPGEF3O95398 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC24.33■■□□□ 1.49
RAPGEF3O95398 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
RAPGEF3O95398 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RAPGEF3O95398 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 HINT2P1-201ENST00000419438 481 ntBASIC24.32■■□□□ 1.48
RAPGEF3O95398 AC007969.1-201ENST00000433675 447 ntBASIC24.32■■□□□ 1.48
RAPGEF3O95398 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 AC005077.2-201ENST00000449786 690 ntBASIC24.32■■□□□ 1.48
RAPGEF3O95398 AC093433.1-201ENST00000458048 571 ntBASIC24.32■■□□□ 1.48
RAPGEF3O95398 PFN2-215ENST00000497148 743 ntTSL 4 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 KLK3-211ENST00000597483 810 ntTSL 2 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 AC005252.2-201ENST00000624630 1141 ntBASIC24.32■■□□□ 1.48
RAPGEF3O95398 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RAPGEF3O95398 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAPGEF3O95398 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 AL591846.1-201ENST00000451736 433 ntBASIC24.31■■□□□ 1.48
RAPGEF3O95398 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 AC009486.1-201ENST00000569860 813 ntBASIC24.31■■□□□ 1.48
RAPGEF3O95398 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC24.31■■□□□ 1.48
RAPGEF3O95398 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAPGEF3O95398 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms