Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKL5O76039 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL5O76039 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL5O76039 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL5O76039 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKL5O76039 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKL5O76039 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
CDKL5O76039 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKL5O76039 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKL5O76039 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDKL5O76039 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.23■□□□□ 0.67
CDKL5O76039 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 PDPK2P-202ENST00000562415 1191 ntBASIC19.23■□□□□ 0.67
CDKL5O76039 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.23■□□□□ 0.67
CDKL5O76039 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKL5O76039 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.23■□□□□ 0.67
CDKL5O76039 AC140113.2-201ENST00000604370 208 ntBASIC19.23■□□□□ 0.67
CDKL5O76039 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDKL5O76039 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKL5O76039 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKL5O76039 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDKL5O76039 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.23■□□□□ 0.67
CDKL5O76039 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.23■□□□□ 0.67
CDKL5O76039 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKL5O76039 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL5O76039 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDKL5O76039 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.22■□□□□ 0.67
CDKL5O76039 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDKL5O76039 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 AC092474.2-201ENST00000424288 719 ntBASIC19.22■□□□□ 0.67
CDKL5O76039 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 KRT18P3-201ENST00000451602 1288 ntBASIC19.22■□□□□ 0.67
CDKL5O76039 AC074386.1-202ENST00000463561 864 ntBASIC19.22■□□□□ 0.67
CDKL5O76039 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.22■□□□□ 0.67
CDKL5O76039 AC068137.2-201ENST00000605408 478 ntBASIC19.22■□□□□ 0.67
CDKL5O76039 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL5O76039 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.22■□□□□ 0.67
CDKL5O76039 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 AL513523.2-202ENST00000427283 2040 ntBASIC19.22■□□□□ 0.67
CDKL5O76039 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.22■□□□□ 0.67
CDKL5O76039 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKL5O76039 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDKL5O76039 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDKL5O76039 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.21■□□□□ 0.67
CDKL5O76039 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKL5O76039 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDKL5O76039 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKL5O76039 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms