Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 APOA2-204ENST00000464492 530 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 AC010234.1-201ENST00000494599 870 ntBASIC7.24□□□□□ -1.25
USH2AO75445 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 AC005252.2-201ENST00000624630 1141 ntBASIC7.24□□□□□ -1.25
USH2AO75445 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 AL442647.2-201ENST00000429864 857 ntBASIC7.24□□□□□ -1.25
USH2AO75445 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 PTK7-212ENST00000476760 902 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 HNRNPA1P48-202ENST00000565308 961 ntBASIC7.24□□□□□ -1.25
USH2AO75445 AC036164.1-201ENST00000570544 333 ntBASIC7.24□□□□□ -1.25
USH2AO75445 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC7.24□□□□□ -1.25
USH2AO75445 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 AP000346.4-201ENST00000614827 381 ntBASIC7.24□□□□□ -1.25
USH2AO75445 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 AC134312.5-201ENST00000568031 1313 ntBASIC7.24□□□□□ -1.25
USH2AO75445 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USH2AO75445 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC7.24□□□□□ -1.25
USH2AO75445 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC7.24□□□□□ -1.25
USH2AO75445 CDK2AP2P3-201ENST00000422476 372 ntBASIC7.24□□□□□ -1.25
USH2AO75445 AC106760.1-201ENST00000508690 800 ntBASIC7.24□□□□□ -1.25
USH2AO75445 AP001063.1-201ENST00000568332 529 ntBASIC7.24□□□□□ -1.25
USH2AO75445 AC021097.1-201ENST00000607902 574 ntBASIC7.24□□□□□ -1.25
USH2AO75445 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 SPIB-207ENST00000597855 564 ntTSL 4 BASIC7.23□□□□□ -1.25
USH2AO75445 AL645939.5-201ENST00000606834 243 ntBASIC7.23□□□□□ -1.25
USH2AO75445 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 AL136982.4-201ENST00000437689 1740 ntBASIC7.23□□□□□ -1.25
USH2AO75445 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC7.23□□□□□ -1.25
USH2AO75445 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 AC125604.1-201ENST00000496255 707 ntBASIC7.23□□□□□ -1.25
USH2AO75445 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC7.23□□□□□ -1.25
USH2AO75445 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
USH2AO75445 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
USH2AO75445 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms