Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC022532.1-201ENST00000624563 1728 ntBASIC13.56□□□□□ -0.24
SSSCA1O60232 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
SSSCA1O60232 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 NUS1P1-201ENST00000446295 882 ntBASIC13.56□□□□□ -0.24
SSSCA1O60232 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.56□□□□□ -0.24
SSSCA1O60232 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC011840.4-201ENST00000578471 627 ntBASIC13.56□□□□□ -0.24
SSSCA1O60232 MIR4497-201ENST00000583208 89 ntBASIC13.56□□□□□ -0.24
SSSCA1O60232 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC013467.2-201ENST00000605472 835 ntBASIC13.56□□□□□ -0.24
SSSCA1O60232 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 SBF1P1-201ENST00000444527 5631 ntBASIC13.56□□□□□ -0.24
SSSCA1O60232 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.56□□□□□ -0.24
SSSCA1O60232 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
SSSCA1O60232 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.56□□□□□ -0.24
SSSCA1O60232 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SSSCA1O60232 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.56□□□□□ -0.24
SSSCA1O60232 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SSSCA1O60232 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
SSSCA1O60232 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SSSCA1O60232 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 AC097376.2-205ENST00000610159 5334 ntBASIC13.55□□□□□ -0.24
SSSCA1O60232 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SSSCA1O60232 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 ACTG1P4-201ENST00000425123 1122 ntBASIC13.55□□□□□ -0.24
SSSCA1O60232 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 YBX1P2-201ENST00000489612 999 ntBASIC13.55□□□□□ -0.24
SSSCA1O60232 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.55□□□□□ -0.24
SSSCA1O60232 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 AC010203.1-204ENST00000548782 407 ntBASIC13.55□□□□□ -0.24
SSSCA1O60232 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.55□□□□□ -0.24
SSSCA1O60232 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.55□□□□□ -0.24
SSSCA1O60232 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 AC139887.4-201ENST00000607877 719 ntBASIC13.55□□□□□ -0.24
SSSCA1O60232 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.55□□□□□ -0.24
SSSCA1O60232 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.55□□□□□ -0.24
SSSCA1O60232 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.55□□□□□ -0.24
SSSCA1O60232 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SSSCA1O60232 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSSCA1O60232 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.55□□□□□ -0.24
SSSCA1O60232 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.54□□□□□ -0.24
SSSCA1O60232 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSSCA1O60232 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 AC097637.2-201ENST00000624096 1997 ntBASIC13.54□□□□□ -0.24
SSSCA1O60232 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 OR2I1P-210ENST00000642037 4691 ntBASIC13.54□□□□□ -0.24
SSSCA1O60232 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSSCA1O60232 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms