Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LYSMD4-203ENST00000378904 2122 ntBASIC17.37■□□□□ 0.37
SOX1O00570 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.37■□□□□ 0.37
SOX1O00570 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.37■□□□□ 0.37
SOX1O00570 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 AC012441.1-201ENST00000446669 685 ntBASIC17.37■□□□□ 0.37
SOX1O00570 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.37■□□□□ 0.37
SOX1O00570 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX1O00570 AC023310.1-201ENST00000554836 735 ntBASIC17.37■□□□□ 0.37
SOX1O00570 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SOX1O00570 AC124283.3-201ENST00000570869 594 ntBASIC17.37■□□□□ 0.37
SOX1O00570 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.37■□□□□ 0.37
SOX1O00570 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.37■□□□□ 0.37
SOX1O00570 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.37■□□□□ 0.37
SOX1O00570 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX1O00570 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX1O00570 AC134312.5-201ENST00000568031 1313 ntBASIC17.37■□□□□ 0.37
SOX1O00570 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SOX1O00570 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX1O00570 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SOX1O00570 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SOX1O00570 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
SOX1O00570 AC018735.1-201ENST00000437208 1502 ntBASIC17.37■□□□□ 0.37
SOX1O00570 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SOX1O00570 KRT18P55-202ENST00000578578 1546 ntBASIC17.37■□□□□ 0.37
SOX1O00570 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SOX1O00570 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX1O00570 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.36■□□□□ 0.37
SOX1O00570 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SOX1O00570 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.36■□□□□ 0.37
SOX1O00570 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 GNRHR2-203ENST00000581100 1187 ntBASIC17.36■□□□□ 0.37
SOX1O00570 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 NDUFV2P1-201ENST00000596415 907 ntBASIC17.36■□□□□ 0.37
SOX1O00570 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.36■□□□□ 0.37
SOX1O00570 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SOX1O00570 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.36■□□□□ 0.37
SOX1O00570 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SOX1O00570 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SOX1O00570 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 CYP46A4P-201ENST00000414953 267 ntBASIC17.35■□□□□ 0.37
SOX1O00570 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 MAGEA5-201ENST00000446757 942 ntBASIC17.35■□□□□ 0.37
SOX1O00570 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.35■□□□□ 0.37
SOX1O00570 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.35■□□□□ 0.37
SOX1O00570 MIR3907-201ENST00000579424 151 ntBASIC17.35■□□□□ 0.37
SOX1O00570 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.35■□□□□ 0.37
SOX1O00570 LINC01115-203ENST00000606068 577 ntBASIC17.35■□□□□ 0.37
SOX1O00570 AL451050.2-201ENST00000606967 682 ntBASIC17.35■□□□□ 0.37
SOX1O00570 CU633904.3-201ENST00000624042 1029 ntBASIC17.35■□□□□ 0.37
SOX1O00570 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SOX1O00570 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms