Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 DBET-201ENST00000630918 3363 ntBASIC16.63■□□□□ 0.25
TRIM49D1C9J1S8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 AP005117.1-202ENST00000581724 1908 ntBASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 PI4KAP1-204ENST00000612579 1703 ntBASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 AC144831.1-201ENST00000573312 2656 ntBASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM49D1C9J1S8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 PTCHD3P3-201ENST00000403073 906 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 RBM17P3-201ENST00000417687 1192 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 ATP5G2P1-201ENST00000433580 426 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 SLC25A6P2-201ENST00000497974 877 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AC139887.3-201ENST00000568585 713 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AF228730.7-201ENST00000641842 219 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 CDC14C-201ENST00000428251 1719 ntBASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM49D1C9J1S8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM49D1C9J1S8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms