Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SBNO1A3KN83 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC22.11■■□□□ 1.13
SBNO1A3KN83 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC22.1■■□□□ 1.13
SBNO1A3KN83 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SBNO1A3KN83 AC092933.1-201ENST00000393644 945 ntBASIC22.1■■□□□ 1.13
SBNO1A3KN83 FO393414.2-201ENST00000405153 598 ntBASIC22.1■■□□□ 1.13
SBNO1A3KN83 AC104596.2-201ENST00000512793 793 ntBASIC22.1■■□□□ 1.13
SBNO1A3KN83 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 MIR5189-201ENST00000577370 114 ntBASIC22.1■■□□□ 1.13
SBNO1A3KN83 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC22.1■■□□□ 1.13
SBNO1A3KN83 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 AL645728.1-201ENST00000366221 2101 ntBASIC22.09■■□□□ 1.13
SBNO1A3KN83 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 AC099336.1-201ENST00000417053 1171 ntBASIC22.09■■□□□ 1.13
SBNO1A3KN83 AL355994.2-201ENST00000447882 704 ntBASIC22.09■■□□□ 1.13
SBNO1A3KN83 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SBNO1A3KN83 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SBNO1A3KN83 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SBNO1A3KN83 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SBNO1A3KN83 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SBNO1A3KN83 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SBNO1A3KN83 AC060834.1-201ENST00000443027 2032 ntBASIC22.08■■□□□ 1.13
SBNO1A3KN83 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SBNO1A3KN83 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC22.08■■□□□ 1.13
SBNO1A3KN83 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SBNO1A3KN83 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SBNO1A3KN83 AL442647.2-201ENST00000429864 857 ntBASIC22.08■■□□□ 1.12
SBNO1A3KN83 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SBNO1A3KN83 CTBP2P5-201ENST00000454986 1264 ntBASIC22.08■■□□□ 1.12
SBNO1A3KN83 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 CD74-212ENST00000524315 584 ntTSL 5 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 TIMM17BP1-201ENST00000545713 516 ntBASIC22.08■■□□□ 1.12
SBNO1A3KN83 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
SBNO1A3KN83 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SBNO1A3KN83 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms