Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
POLR1DQ9Y2S0 AC006538.1-201ENST00000567905 1585 ntBASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 GGTLC5P-201ENST00000617623 998 ntBASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 AC002310.6-201ENST00000624451 1377 ntBASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
POLR1DQ9Y2S0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 TNRC18P3-201ENST00000441896 2691 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 RPS2P28-201ENST00000314255 741 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 AC004870.1-201ENST00000315132 882 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 FAM197Y8-203ENST00000450145 560 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 RNPS1P1-201ENST00000507437 918 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 UNC93B7-201ENST00000509439 705 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 AC013467.2-201ENST00000605472 835 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 AL691432.3-201ENST00000621860 400 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 AC005593.1-201ENST00000624894 515 ntBASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
POLR1DQ9Y2S0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms