Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AC087163.2-201ENST00000457299 853 ntBASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AC087388.1-201ENST00000571370 1112 ntBASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 NPAP1P7-201ENST00000613027 823 ntBASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 AL356309.3-201ENST00000624132 1934 ntBASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 REXO1L8P-201ENST00000604378 1897 ntBASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CDC42SE2Q9NRR3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 RBM17P3-201ENST00000417687 1192 ntBASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AC139887.3-201ENST00000568585 713 ntBASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AC069148.1-201ENST00000608741 768 ntBASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CDC42SE2Q9NRR3 AP000550.4-202ENST00000639755 178 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms