Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AC105233.2-201ENST00000523697 349 ntBASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AF228730.5-201ENST00000530288 346 ntBASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 AC008761.3-201ENST00000624803 892 ntBASIC17.13■□□□□ 0.33
HPS4Q9NQG7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS4Q9NQG7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 AP3S2-216ENST00000617003 1561 ntBASIC17.12■□□□□ 0.33
HPS4Q9NQG7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 AL512638.1-201ENST00000457493 794 ntBASIC17.12■□□□□ 0.33
HPS4Q9NQG7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 RARRES2P9-201ENST00000565168 469 ntBASIC17.12■□□□□ 0.33
HPS4Q9NQG7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS4Q9NQG7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 FOXO1B-201ENST00000504678 1527 ntBASIC17.11■□□□□ 0.33
HPS4Q9NQG7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 AC004890.2-204ENST00000481968 304 ntBASIC17.11■□□□□ 0.33
HPS4Q9NQG7 KRT18P34-201ENST00000488218 1270 ntBASIC17.11■□□□□ 0.33
HPS4Q9NQG7 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.11■□□□□ 0.33
HPS4Q9NQG7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 AC018529.1-201ENST00000613063 361 ntBASIC17.11■□□□□ 0.33
HPS4Q9NQG7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS4Q9NQG7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms