Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 AL078644.1-201ENST00000609881 752 ntBASIC17.72■□□□□ 0.43
SIX2Q9NPC8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX2Q9NPC8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AC016027.1-202ENST00000607927 1699 ntBASIC17.71■□□□□ 0.43
SIX2Q9NPC8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AL590627.1-203ENST00000421194 1026 ntBASIC17.71■□□□□ 0.43
SIX2Q9NPC8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AL513190.1-201ENST00000621254 727 ntBASIC17.71■□□□□ 0.43
SIX2Q9NPC8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AC069224.1-201ENST00000566372 1715 ntBASIC17.71■□□□□ 0.43
SIX2Q9NPC8 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SIX2Q9NPC8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 LINC02447-202ENST00000501888 2146 ntBASIC17.7■□□□□ 0.42
SIX2Q9NPC8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 BX640515.1-201ENST00000617215 977 ntBASIC17.7■□□□□ 0.42
SIX2Q9NPC8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 AC092865.6-201ENST00000642101 219 ntBASIC17.7■□□□□ 0.42
SIX2Q9NPC8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX2Q9NPC8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX2Q9NPC8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX2Q9NPC8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX2Q9NPC8 AL162727.3-201ENST00000635661 2787 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms