Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 FAM207CP-201ENST00000443486 507 ntBASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 AL138918.1-201ENST00000568306 659 ntBASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 MIR4453-201ENST00000584019 89 ntBASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 AL391005.1-201ENST00000623953 2435 ntBASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TM9SF3Q9HD45 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 AC244107.1-201ENST00000442033 332 ntBASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 LINC02560-201ENST00000596379 459 ntBASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 AC008761.3-201ENST00000624803 892 ntBASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 AC018695.7-201ENST00000624587 2492 ntBASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM9SF3Q9HD45 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 KRT8P49-201ENST00000604166 1432 ntBASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AL021920.2-201ENST00000624828 1351 ntBASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AC005034.1-201ENST00000426657 489 ntBASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AC092580.3-201ENST00000430932 139 ntBASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 CYP2A7P1-201ENST00000595391 815 ntBASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AL035252.4-201ENST00000624174 288 ntBASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.54■□□□□ 0.24
TM9SF3Q9HD45 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms