Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 AL009183.1-201ENST00000603760 355 ntBASIC16.56■□□□□ 0.24
MRM3Q9HC36 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.56■□□□□ 0.24
MRM3Q9HC36 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MRM3Q9HC36 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MRM3Q9HC36 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 AL603832.2-201ENST00000566195 2125 ntBASIC16.55■□□□□ 0.24
MRM3Q9HC36 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MRM3Q9HC36 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MRM3Q9HC36 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 MIR648-201ENST00000385046 94 ntBASIC16.54■□□□□ 0.24
MRM3Q9HC36 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 AC034105.1-201ENST00000563488 319 ntBASIC16.54■□□□□ 0.24
MRM3Q9HC36 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 U82695.1-201ENST00000635752 1889 ntBASIC16.54■□□□□ 0.24
MRM3Q9HC36 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
MRM3Q9HC36 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MRM3Q9HC36 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.53■□□□□ 0.24
MRM3Q9HC36 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MRM3Q9HC36 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.53■□□□□ 0.24
MRM3Q9HC36 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms