Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.37■□□□□ 0.05
POLR2J3Q9H1A7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AL596087.1-201ENST00000400979 1969 ntBASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 LAGE3P1-201ENST00000425356 484 ntBASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AC008608.2-201ENST00000606089 416 ntBASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AP001350.2-201ENST00000625104 1094 ntBASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AC068587.6-202ENST00000641839 5619 ntBASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 FLJ16779-201ENST00000612722 7638 ntBASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
POLR2J3Q9H1A7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AL353732.1-201ENST00000569618 1459 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AC131009.4-201ENST00000624048 1740 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 PTCHD3P3-201ENST00000403073 906 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 TSPY19P-201ENST00000418461 509 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 TSPY18P-201ENST00000441642 509 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AL445228.2-201ENST00000605589 952 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 GGTLC5P-201ENST00000617623 998 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 REXO1L6P-202ENST00000619970 1078 ntBASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
POLR2J3Q9H1A7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms