Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 RPL37AP1-201ENST00000412502 279 ntBASIC17.2■□□□□ 0.34
LRRC3Q9BY71 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 AL353705.2-201ENST00000428243 662 ntBASIC17.2■□□□□ 0.34
LRRC3Q9BY71 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 AC009407.1-201ENST00000568958 598 ntBASIC17.2■□□□□ 0.34
LRRC3Q9BY71 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 TEX28P1-201ENST00000613479 1221 ntBASIC17.2■□□□□ 0.34
LRRC3Q9BY71 TEX28P2-201ENST00000617764 1221 ntBASIC17.2■□□□□ 0.34
LRRC3Q9BY71 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC3Q9BY71 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC093724.1-201ENST00000448659 1027 ntBASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC105021.1-202ENST00000570572 669 ntBASIC17.19■□□□□ 0.34
LRRC3Q9BY71 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AL844908.2-201ENST00000609461 460 ntBASIC17.19■□□□□ 0.34
LRRC3Q9BY71 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 AC060834.1-201ENST00000443027 2032 ntBASIC17.19■□□□□ 0.34
LRRC3Q9BY71 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3Q9BY71 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 CRB3P1-201ENST00000449338 276 ntBASIC17.18■□□□□ 0.34
LRRC3Q9BY71 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.18■□□□□ 0.34
LRRC3Q9BY71 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 AC087499.5-201ENST00000452760 1342 ntBASIC17.18■□□□□ 0.34
LRRC3Q9BY71 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3Q9BY71 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC3Q9BY71 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms