Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 AL513480.1-201ENST00000451731 511 ntBASIC14.89□□□□□ -0.03
USB1Q9BQ65 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 YBX1P5-201ENST00000509441 847 ntBASIC14.89□□□□□ -0.03
USB1Q9BQ65 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 AC010327.4-202ENST00000591484 748 ntBASIC14.89□□□□□ -0.03
USB1Q9BQ65 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 EGFEM1P-202ENST00000431685 1563 ntBASIC14.89□□□□□ -0.03
USB1Q9BQ65 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
USB1Q9BQ65 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.89□□□□□ -0.03
USB1Q9BQ65 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 AC211486.1-202ENST00000416371 468 ntBASIC14.88□□□□□ -0.03
USB1Q9BQ65 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 AC004967.1-201ENST00000453589 447 ntBASIC14.88□□□□□ -0.03
USB1Q9BQ65 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 AC211476.1-201ENST00000503899 468 ntBASIC14.88□□□□□ -0.03
USB1Q9BQ65 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 AL391001.1-201ENST00000602747 715 ntBASIC14.88□□□□□ -0.03
USB1Q9BQ65 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 AC025580.3-201ENST00000617932 1424 ntBASIC14.88□□□□□ -0.03
USB1Q9BQ65 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
USB1Q9BQ65 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.88□□□□□ -0.03
USB1Q9BQ65 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms